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Table 2 Deduced amino acid sequence of putative mature CRS peptides

From: Regional variations in Paneth cell antimicrobial peptide expression along the mouse intestinal tract

 

Deduced amino acid sequence

mRNA accession number

Mouse strains

Reference

CRS1C sequences

Novel CRS1C

    

CRS1C-4

LQDA AQRRFP WCRKCR VCQKCQ VCQKCPVCPTCPQ CPKQ PLCE ERQNKT AITTQAPNTQ HKGC

EU760893

FVB

this report

CRS1C-5

LQDV AQRRFP WCRKCR VCQKCQ VCQKCPVCPTCPL CPKQ PLCE ERQNKT AITTQAPNTQ HKGC

EU760894

FVB

this report

CRS1C-6

LQDV AQRRFP WCRKCP VCQKCQ VCQKCPVCPTCPQ CPKL PLCK ERQNKS AITTQAPNTQ HKGC

EU760895

FVB

this report

Annotated CRS1C

    

CRS1C

LQDV AQRRFP WCRKCR VCQKCQ VCQKCPVCPTCPQ CPKQ PLCE ERQNKT AITTQAPNTQ HKGC

M33226

FVB, Outbred Swiss albino

[9]

CRS1C-1

LQDV AQRRFP WCRKCR VCQKCE VCQKCPVCPTCPQ CPKQ PLCK ERQNKT AITTQAPNTH HKGC

XM_001006437

C57BL/6*

[15]

CRS1C-2

LQDV AQRRFL WCRKCP VCQKCQ VCQKCPVCPTCPQ CPKQ PLCE ERQNKT AITTQAPNTQ HKGC

AY761183

C57BL/6

[15]

CRS1C-3

LQYV AQRRFP WCRKCP VCQKCQ VCQKCPVCPTCPQ CPKL PLCK ERQNKS AITTQAPNTQ HKGC

AY761184

C57BL/6

[15]

CRS4C sequences

Novel CRS4C-1/2/3

    

CRS4C-3f

LQDAAL GWG RRCPW CPP CPN CRR CPR CPT CPS CN CNPK

EU760896

FVB

this report

Annotated CRS4C-1/2/3

    

CRS4C-1a/e/f/h/j

LQDAAL GWG RRCPQ CPR CPS CPS CPR CPR CPR CK CNPK

M33227

FVB, Outbred Swiss albino, C3H/HeN, 129/SVJ

[9]

CRS4C-1b/d/g/i

LQDAAV GWG RRCPQ CPR CPS CPS CPR CPR CPR CK CNPK

AJ564861

FVB, 129/SVJ, C3H/HeN

[6]

CRS4C-2/c/d

LQDAAL GWG RRCPR CPP CPR CSW CPR CPT CPR CN CNPK

NM_007848

FVB, 129/SVJ, C3H/HeN

[6]

CRS4C-2b

LQDAAL GWG RRCPR CPP CPR CSW CPG CPT CPR CN CNPK

AJ564871

C3H/HeN

[11]

CRS4C-3/a/b/e

LQDAAL GWG RRCPR CPP CPN CRR CPR CPT CPS CN CNPK

AJ564873

FVB, 129/SVJ, C3H/HeN

[6]

CRS4C-3c

LQDAAL GWS RRCPR CPP CPN CRR CPR CPT CPS CN CNPK

AJ564876

C3H/HeN

[11]

CRS4C-3d

LQDAAL GWG RRCPR CPP CPN CRR CPR CPT CPR CN CNPK

AJ564877

FVB, C3H/HeN

[11]

Related CRS

CRS4C-4

LQDAAVGMARPCPPCPSCPSCPWCPMCPRCPSCKCNPK

NM_007845

129/SVJ

[6]

CRS4C-5

LQDAAAIRRARRCPPCPSCLSCPWCPRCLRCPMCKCNPK

NM_007846

129/SVJ*

[6]

CRS4C-6

   LQVSGLGKPPQCPKCPVCSKCPQCPQCPQCPGCPRCNCMTK

AY761185

C57BL/6

[15]

  1. Underlined: Variations in amino acid sequence within the group of CRS1C and CRS4C, respectively. One example of mRNA accession number only. * = predicted from genome sequence, no mRNA found.